STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TNE9_9ROSIUncharacterized protein. (316 aa)    
Predicted Functional Partners:
V4T132_9ROSI
Uncharacterized protein.
  
 0.975
V4TIU2_9ROSI
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.972
V4TY40_9ROSI
TRANSKETOLASE_1 domain-containing protein.
   
 0.955
V4VBL2_9ROSI
Transket_pyr domain-containing protein.
   
 0.955
V4T8J9_9ROSI
Phosphoribulokinase.
   
 
 0.949
V4U716_9ROSI
Uncharacterized protein.
  
 
 0.934
V4W5U2_9ROSI
Uncharacterized protein; Belongs to the phosphohexose mutase family.
  
 
 0.934
V4TEH2_9ROSI
Pribosyltran_N domain-containing protein.
  
 
 0.923
V4TG09_9ROSI
Pribosyltran_N domain-containing protein.
  
 
 0.923
V4TZW8_9ROSI
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.919
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.