STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TSP7_9ROSIPeptidylprolyl isomerase. (612 aa)    
Predicted Functional Partners:
V4RRP5_9ROSI
Brix domain-containing protein.
   
 
 0.681
V4SVZ5_9ROSI
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
   0.674
V4U8Y4_9ROSI
Peptidylprolyl isomerase.
  
 0.588
V4V9M4_9ROSI
Peptidylprolyl isomerase.
  
   
0.547
V4VMN8_9ROSI
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.525
V4TRS4_9ROSI
Peptidylprolyl isomerase.
  
   
 0.522
V4SZN2_9ROSI
Nop domain-containing protein.
   
  0.521
V4SW20_9ROSI
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.520
V4SPE6_9ROSI
Nop domain-containing protein.
   
   0.513
V4T282_9ROSI
Nop domain-containing protein.
   
   0.513
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.