STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TVQ9_9ROSIHat1_N domain-containing protein. (466 aa)    
Predicted Functional Partners:
V4RTN9_9ROSI
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.994
V4SPI7_9ROSI
Uncharacterized protein.
  
 
 0.978
V4RXW0_9ROSI
WD_REPEATS_REGION domain-containing protein.
   
 0.960
V4S624_9ROSI
WD_REPEATS_REGION domain-containing protein.
   
 0.960
V4VQG1_9ROSI
WD_REPEATS_REGION domain-containing protein.
   
 0.960
V4WDY7_9ROSI
WD_REPEATS_REGION domain-containing protein.
   
 0.960
V4VXW5_9ROSI
AAA_16 domain-containing protein.
    
 
 0.956
V4URW4_9ROSI
Uncharacterized protein.
   
 
 0.945
V4TGF1_9ROSI
ORC_WH_C domain-containing protein.
   
 
 0.926
V4TLJ8_9ROSI
Uncharacterized protein.
   
 
 0.926
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.