STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TZG7_9ROSIOVATE domain-containing protein. (251 aa)    
Predicted Functional Partners:
V4UPL3_9ROSI
OVATE domain-containing protein.
      
 0.550
V4V0I6_9ROSI
OVATE domain-containing protein.
      
 0.544
V4TFW6_9ROSI
Uncharacterized protein.
  
     0.527
V4T1L4_9ROSI
OVATE domain-containing protein.
  
   
 0.517
V4U051_9ROSI
Uncharacterized protein.
  
     0.508
V4RYH6_9ROSI
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.502
V4RH01_9ROSI
AAI domain-containing protein; Belongs to the plant LTP family.
  
     0.497
V4SKV7_9ROSI
Uncharacterized protein.
  
     0.496
V4T1I2_9ROSI
F-box domain-containing protein.
  
  0.495
V4W0B5_9ROSI
Uncharacterized protein.
  
     0.487
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.