STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4U6W0_9ROSIPPC domain-containing protein. (351 aa)    
Predicted Functional Partners:
V4SWF2_9ROSI
TF-B3 domain-containing protein.
  
     0.485
V4THU2_9ROSI
X8 domain-containing protein.
  
     0.456
V4UKQ3_9ROSI
Uncharacterized protein.
  
     0.442
V4T709_9ROSI
LOB domain-containing protein.
  
     0.425
V4TF27_9ROSI
ZF-HD dimerization-type domain-containing protein.
  
     0.417
V4TGP2_9ROSI
LOB domain-containing protein.
  
     0.416
V4UZ83_9ROSI
Uncharacterized protein.
  
 
   0.410
V4VVB8_9ROSI
Uncharacterized protein.
  
 
   0.407
V4S2B2_9ROSI
TPR_REGION domain-containing protein.
  
     0.405
V4SCQ7_9ROSI
BHLH domain-containing protein.
  
  0.404
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.