Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4RY23_9ROSI | V4S1V2_9ROSI | V4RY23 | V4S1V2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.944 |
V4RY23_9ROSI | V4SBK3_9ROSI | V4RY23 | V4SBK3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RPOLD domain-containing protein. | 0.994 |
V4RY23_9ROSI | V4SX41_9ROSI | V4RY23 | V4SX41 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein; Belongs to the MT-A70-like family. | 0.700 |
V4RY23_9ROSI | V4THC2_9ROSI | V4RY23 | V4THC2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Helicase ATP-binding domain-containing protein. | 0.944 |
V4RY23_9ROSI | V4TJ42_9ROSI | V4RY23 | V4TJ42 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Nuclear cap-binding protein subunit 2. | 0.796 |
V4RY23_9ROSI | V4TS78_9ROSI | V4RY23 | V4TS78 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Helicase C-terminal domain-containing protein. | 0.944 |
V4RY23_9ROSI | V4U1W1_9ROSI | V4RY23 | V4U1W1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. | 0.996 |
V4RY23_9ROSI | V4U7K0_9ROSI | V4RY23 | V4U7K0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein; Belongs to the MT-A70-like family. | 0.700 |
V4RY23_9ROSI | V4W7L9_9ROSI | V4RY23 | V4W7L9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.595 |
V4S1V2_9ROSI | V4RY23_9ROSI | V4S1V2 | V4RY23 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.944 |
V4S1V2_9ROSI | V4SBK3_9ROSI | V4S1V2 | V4SBK3 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.940 |
V4S1V2_9ROSI | V4SX41_9ROSI | V4S1V2 | V4SX41 | Uncharacterized protein. | Uncharacterized protein; Belongs to the MT-A70-like family. | 0.706 |
V4S1V2_9ROSI | V4U1W1_9ROSI | V4S1V2 | V4U1W1 | Uncharacterized protein. | Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. | 0.938 |
V4S1V2_9ROSI | V4U7K0_9ROSI | V4S1V2 | V4U7K0 | Uncharacterized protein. | Uncharacterized protein; Belongs to the MT-A70-like family. | 0.706 |
V4SBK3_9ROSI | V4RY23_9ROSI | V4SBK3 | V4RY23 | RPOLD domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.994 |
V4SBK3_9ROSI | V4S1V2_9ROSI | V4SBK3 | V4S1V2 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.940 |
V4SBK3_9ROSI | V4SX41_9ROSI | V4SBK3 | V4SX41 | RPOLD domain-containing protein. | Uncharacterized protein; Belongs to the MT-A70-like family. | 0.699 |
V4SBK3_9ROSI | V4THC2_9ROSI | V4SBK3 | V4THC2 | RPOLD domain-containing protein. | Helicase ATP-binding domain-containing protein. | 0.940 |
V4SBK3_9ROSI | V4TJ42_9ROSI | V4SBK3 | V4TJ42 | RPOLD domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.857 |
V4SBK3_9ROSI | V4TS78_9ROSI | V4SBK3 | V4TS78 | RPOLD domain-containing protein. | Helicase C-terminal domain-containing protein. | 0.940 |
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