Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4RPU6_9ROSI | V4SDV9_9ROSI | V4RPU6 | V4SDV9 | Uncharacterized protein. | Uncharacterized protein. | 0.524 |
V4RPU6_9ROSI | V4U4S1_9ROSI | V4RPU6 | V4U4S1 | Uncharacterized protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.502 |
V4RPU6_9ROSI | V4U9M5_9ROSI | V4RPU6 | V4U9M5 | Uncharacterized protein. | Uncharacterized protein. | 0.491 |
V4RPU6_9ROSI | V4UA46_9ROSI | V4RPU6 | V4UA46 | Uncharacterized protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.472 |
V4RPU6_9ROSI | V4VIS9_9ROSI | V4RPU6 | V4VIS9 | Uncharacterized protein. | Lipase_3 domain-containing protein. | 0.470 |
V4RPU6_9ROSI | V4VXN8_9ROSI | V4RPU6 | V4VXN8 | Uncharacterized protein. | F-box domain-containing protein. | 0.477 |
V4SDV9_9ROSI | V4RPU6_9ROSI | V4SDV9 | V4RPU6 | Uncharacterized protein. | Uncharacterized protein. | 0.524 |
V4SDV9_9ROSI | V4U4S1_9ROSI | V4SDV9 | V4U4S1 | Uncharacterized protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.466 |
V4SDV9_9ROSI | V4U9M5_9ROSI | V4SDV9 | V4U9M5 | Uncharacterized protein. | Uncharacterized protein. | 0.495 |
V4SDV9_9ROSI | V4UA46_9ROSI | V4SDV9 | V4UA46 | Uncharacterized protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.489 |
V4SDV9_9ROSI | V4UI06_9ROSI | V4SDV9 | V4UI06 | Uncharacterized protein. | Uncharacterized protein. | 0.500 |
V4SDV9_9ROSI | V4VXN8_9ROSI | V4SDV9 | V4VXN8 | Uncharacterized protein. | F-box domain-containing protein. | 0.430 |
V4SE12_9ROSI | V4U9M5_9ROSI | V4SE12 | V4U9M5 | Uncharacterized protein. | Uncharacterized protein. | 0.654 |
V4T9I1_9ROSI | V4U4S1_9ROSI | V4T9I1 | V4U4S1 | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.475 |
V4T9I1_9ROSI | V4U9M5_9ROSI | V4T9I1 | V4U9M5 | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | Uncharacterized protein. | 0.471 |
V4T9I1_9ROSI | V4UA46_9ROSI | V4T9I1 | V4UA46 | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.513 |
V4T9I1_9ROSI | V4UI06_9ROSI | V4T9I1 | V4UI06 | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | Uncharacterized protein. | 0.503 |
V4T9I1_9ROSI | V4VIS9_9ROSI | V4T9I1 | V4VIS9 | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | Lipase_3 domain-containing protein. | 0.486 |
V4T9I1_9ROSI | V4VXN8_9ROSI | V4T9I1 | V4VXN8 | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | F-box domain-containing protein. | 0.485 |
V4U241_9ROSI | V4U4S1_9ROSI | V4U241 | V4U4S1 | ULP_PROTEASE domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.508 |
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