STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4UCZ2_9ROSIUncharacterized protein. (835 aa)    
Predicted Functional Partners:
V4VSI7_9ROSI
Sas10 domain-containing protein.
   
 0.971
V4UHS9_9ROSI
Uncharacterized protein.
   
 0.959
V4SR80_9ROSI
Uncharacterized protein.
   
 0.938
V4TWL6_9ROSI
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.925
V4TRJ3_9ROSI
Uncharacterized protein.
   
 0.888
V4RP61_9ROSI
Uncharacterized protein.
   
 0.881
V4STD8_9ROSI
Uncharacterized protein.
   
 
 0.881
V4U373_9ROSI
Uncharacterized protein.
   
 0.857
V4T620_9ROSI
WD_REPEATS_REGION domain-containing protein.
   
 0.833
V4TUP0_9ROSI
Uncharacterized protein.
   
 
 0.821
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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