Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4RW26_9ROSI | V4SPF6_9ROSI | V4RW26 | V4SPF6 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.974 |
V4RW26_9ROSI | V4SR87_9ROSI | V4RW26 | V4SR87 | Uncharacterized protein. | PsbP domain-containing protein. | 0.986 |
V4RW26_9ROSI | V4T2Y2_9ROSI | V4RW26 | V4T2Y2 | Uncharacterized protein. | Uncharacterized protein. | 0.992 |
V4RW26_9ROSI | V4TSK0_9ROSI | V4RW26 | V4TSK0 | Uncharacterized protein. | Uncharacterized protein. | 0.986 |
V4RW26_9ROSI | V4TTK5_9ROSI | V4RW26 | V4TTK5 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.981 |
V4RW26_9ROSI | V4TU09_9ROSI | V4RW26 | V4TU09 | Uncharacterized protein. | Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family. | 0.845 |
V4RW26_9ROSI | V4UE58_9ROSI | V4RW26 | V4UE58 | Uncharacterized protein. | Uncharacterized protein. | 0.926 |
V4RW26_9ROSI | V4UKN6_9ROSI | V4RW26 | V4UKN6 | Uncharacterized protein. | Uncharacterized protein. | 0.958 |
V4RW26_9ROSI | V4UUH6_9ROSI | V4RW26 | V4UUH6 | Uncharacterized protein. | Uncharacterized protein. | 0.958 |
V4RW26_9ROSI | V4W845_9ROSI | V4RW26 | V4W845 | Uncharacterized protein. | Uncharacterized protein. | 0.983 |
V4SPF6_9ROSI | V4RW26_9ROSI | V4SPF6 | V4RW26 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.974 |
V4SPF6_9ROSI | V4SR87_9ROSI | V4SPF6 | V4SR87 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | PsbP domain-containing protein. | 0.973 |
V4SPF6_9ROSI | V4T2Y2_9ROSI | V4SPF6 | V4T2Y2 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.967 |
V4SPF6_9ROSI | V4TSK0_9ROSI | V4SPF6 | V4TSK0 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.975 |
V4SPF6_9ROSI | V4TTK5_9ROSI | V4SPF6 | V4TTK5 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.989 |
V4SPF6_9ROSI | V4TU09_9ROSI | V4SPF6 | V4TU09 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family. | 0.448 |
V4SPF6_9ROSI | V4UE58_9ROSI | V4SPF6 | V4UE58 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.794 |
V4SPF6_9ROSI | V4UKN6_9ROSI | V4SPF6 | V4UKN6 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.853 |
V4SPF6_9ROSI | V4UUH6_9ROSI | V4SPF6 | V4UUH6 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.800 |
V4SPF6_9ROSI | V4W845_9ROSI | V4SPF6 | V4W845 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.971 |
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