STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4UFT3_9ROSIFe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (318 aa)    
Predicted Functional Partners:
V4WDU2_9ROSI
Aminotran_1_2 domain-containing protein.
     
 0.764
V4VU32_9ROSI
Uncharacterized protein.
  
  
 0.756
V4VU37_9ROSI
Uncharacterized protein.
  
  
 0.756
V4W1E0_9ROSI
Uncharacterized protein.
  
  
 0.756
V4SQK3_9ROSI
Aminotran_1_2 domain-containing protein.
     
 0.741
V4TD18_9ROSI
Aminotran_1_2 domain-containing protein.
     
 0.737
V4THA0_9ROSI
Aminotran_1_2 domain-containing protein.
     
 0.737
V4SGW2_9ROSI
Aminotran_1_2 domain-containing protein.
     
  0.650
V4RZ66_9ROSI
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.488
V4ULU2_9ROSI
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.475
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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