STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4UKD6_9ROSIElong-fact-P_C domain-containing protein. (74 aa)    
Predicted Functional Partners:
V4SM89_9ROSI
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.957
V4T124_9ROSI
Uncharacterized protein.
  
   0.933
V4SJP9_9ROSI
Ribosomal_TL5_C domain-containing protein.
  
 
 0.923
V4TF33_9ROSI
Uncharacterized protein.
  
 
 0.920
V4TVR5_9ROSI
Uncharacterized protein.
   
 0.916
V4VSP8_9ROSI
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
   0.908
V4UTM1_9ROSI
Uncharacterized protein.
  
 
 0.907
V4TZC3_9ROSI
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
  
 0.903
V4S3T5_9ROSI
Ribosomal_S10 domain-containing protein.
   
 
 0.898
V4UI67_9ROSI
Ribosomal_S10 domain-containing protein.
   
 
 0.898
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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