STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4UMR3_9ROSIRNase H domain-containing protein. (164 aa)    
Predicted Functional Partners:
V4T124_9ROSI
Uncharacterized protein.
   
   0.780
V4UH72_9ROSI
Uncharacterized protein.
   
   0.651
V4VNI2_9ROSI
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.607
V4UUQ0_9ROSI
Ubiquitin-like domain-containing protein.
    
  0.539
V4S433_9ROSI
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.469
V4SLP4_9ROSI
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
    
 
 0.462
V4RLB2_9ROSI
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
   0.457
V4S3T5_9ROSI
Ribosomal_S10 domain-containing protein.
    
   0.457
V4S7I3_9ROSI
Uncharacterized protein.
    
   0.457
V4SCB6_9ROSI
WD_REPEATS_REGION domain-containing protein.
    
   0.457
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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