STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4V704_9ROSIUncharacterized protein. (143 aa)    
Predicted Functional Partners:
V4TD33_9ROSI
Uncharacterized protein.
  
     0.492
V4RV01_9ROSI
AvrRpt-cleavage domain-containing protein.
  
     0.489
V4U532_9ROSI
FLZ-type domain-containing protein.
  
     0.485
V4SI76_9ROSI
Usp domain-containing protein.
  
     0.484
V4TKZ5_9ROSI
Uncharacterized protein.
  
     0.481
V4S9F4_9ROSI
Uncharacterized protein.
  
     0.478
V4V4R8_9ROSI
Uncharacterized protein.
  
     0.476
V4UDF8_9ROSI
Uncharacterized protein.
  
     0.471
V4SB82_9ROSI
Uncharacterized protein.
  
     0.470
V4V762_9ROSI
F-box domain-containing protein.
  
     0.461
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.