Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4S4V9_9ROSI | V4SUL9_9ROSI | V4S4V9 | V4SUL9 | General transcription factor IIH subunit. | Uncharacterized protein. | 0.961 |
V4S4V9_9ROSI | V4T5D6_9ROSI | V4S4V9 | V4T5D6 | General transcription factor IIH subunit. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.982 |
V4S4V9_9ROSI | V4TQ52_9ROSI | V4S4V9 | V4TQ52 | General transcription factor IIH subunit. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.978 |
V4S4V9_9ROSI | V4TW95_9ROSI | V4S4V9 | V4TW95 | General transcription factor IIH subunit. | HTH TFE/IIEalpha-type domain-containing protein. | 0.978 |
V4S4V9_9ROSI | V4UIJ4_9ROSI | V4S4V9 | V4UIJ4 | General transcription factor IIH subunit. | Uncharacterized protein. | 0.989 |
V4S4V9_9ROSI | V4UKZ3_9ROSI | V4S4V9 | V4UKZ3 | General transcription factor IIH subunit. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.986 |
V4S4V9_9ROSI | V4UR41_9ROSI | V4S4V9 | V4UR41 | General transcription factor IIH subunit. | Uncharacterized protein. | 0.959 |
V4S4V9_9ROSI | V4V8Z5_9ROSI | V4S4V9 | V4V8Z5 | General transcription factor IIH subunit. | HELICc2 domain-containing protein. | 0.881 |
V4S4V9_9ROSI | V4WD26_9ROSI | V4S4V9 | V4WD26 | General transcription factor IIH subunit. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.989 |
V4SUL9_9ROSI | V4S4V9_9ROSI | V4SUL9 | V4S4V9 | Uncharacterized protein. | General transcription factor IIH subunit. | 0.961 |
V4SUL9_9ROSI | V4T5D6_9ROSI | V4SUL9 | V4T5D6 | Uncharacterized protein. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.964 |
V4SUL9_9ROSI | V4TQ52_9ROSI | V4SUL9 | V4TQ52 | Uncharacterized protein. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.980 |
V4SUL9_9ROSI | V4TW95_9ROSI | V4SUL9 | V4TW95 | Uncharacterized protein. | HTH TFE/IIEalpha-type domain-containing protein. | 0.993 |
V4SUL9_9ROSI | V4UIJ4_9ROSI | V4SUL9 | V4UIJ4 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
V4SUL9_9ROSI | V4UKZ3_9ROSI | V4SUL9 | V4UKZ3 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.922 |
V4SUL9_9ROSI | V4UR41_9ROSI | V4SUL9 | V4UR41 | Uncharacterized protein. | Uncharacterized protein. | 0.960 |
V4SUL9_9ROSI | V4V8Z5_9ROSI | V4SUL9 | V4V8Z5 | Uncharacterized protein. | HELICc2 domain-containing protein. | 0.882 |
V4SUL9_9ROSI | V4WD26_9ROSI | V4SUL9 | V4WD26 | Uncharacterized protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.980 |
V4T5D6_9ROSI | V4S4V9_9ROSI | V4T5D6 | V4S4V9 | CYCLIN domain-containing protein; Belongs to the cyclin family. | General transcription factor IIH subunit. | 0.982 |
V4T5D6_9ROSI | V4SUL9_9ROSI | V4T5D6 | V4SUL9 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Uncharacterized protein. | 0.964 |
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