STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4VMW9_9ROSICASP_C domain-containing protein. (682 aa)    
Predicted Functional Partners:
V4S307_9ROSI
Guanylate kinase-like domain-containing protein.
    
 
 0.624
V4S7Y9_9ROSI
Guanylate kinase-like domain-containing protein.
    
 
 0.624
V4UP55_9ROSI
Guanylate kinase-like domain-containing protein.
    
 
 0.624
V4SNK1_9ROSI
Uncharacterized protein.
   
  
 0.577
V4SKX2_9ROSI
TP_methylase domain-containing protein.
      
 0.569
V4UHS9_9ROSI
Uncharacterized protein.
      
 0.569
V4VE22_9ROSI
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
      
 0.569
V4WD26_9ROSI
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
      
 0.568
V4UC83_9ROSI
Uncharacterized protein.
      
 0.553
V4T7S8_9ROSI
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
      
 0.543
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
Server load: low (16%) [HD]