Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4S307_9ROSI | V4S7Y9_9ROSI | V4S307 | V4S7Y9 | Guanylate kinase-like domain-containing protein. | Guanylate kinase-like domain-containing protein. | 0.912 |
V4S307_9ROSI | V4UC83_9ROSI | V4S307 | V4UC83 | Guanylate kinase-like domain-containing protein. | Uncharacterized protein. | 0.595 |
V4S307_9ROSI | V4UP55_9ROSI | V4S307 | V4UP55 | Guanylate kinase-like domain-containing protein. | Guanylate kinase-like domain-containing protein. | 0.912 |
V4S307_9ROSI | V4VMW9_9ROSI | V4S307 | V4VMW9 | Guanylate kinase-like domain-containing protein. | CASP_C domain-containing protein. | 0.624 |
V4S7Y9_9ROSI | V4S307_9ROSI | V4S7Y9 | V4S307 | Guanylate kinase-like domain-containing protein. | Guanylate kinase-like domain-containing protein. | 0.912 |
V4S7Y9_9ROSI | V4UC83_9ROSI | V4S7Y9 | V4UC83 | Guanylate kinase-like domain-containing protein. | Uncharacterized protein. | 0.595 |
V4S7Y9_9ROSI | V4UP55_9ROSI | V4S7Y9 | V4UP55 | Guanylate kinase-like domain-containing protein. | Guanylate kinase-like domain-containing protein. | 0.901 |
V4S7Y9_9ROSI | V4VMW9_9ROSI | V4S7Y9 | V4VMW9 | Guanylate kinase-like domain-containing protein. | CASP_C domain-containing protein. | 0.624 |
V4SKX2_9ROSI | V4SNK1_9ROSI | V4SKX2 | V4SNK1 | TP_methylase domain-containing protein. | Uncharacterized protein. | 0.569 |
V4SKX2_9ROSI | V4UHS9_9ROSI | V4SKX2 | V4UHS9 | TP_methylase domain-containing protein. | Uncharacterized protein. | 0.591 |
V4SKX2_9ROSI | V4VE22_9ROSI | V4SKX2 | V4VE22 | TP_methylase domain-containing protein. | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | 0.584 |
V4SKX2_9ROSI | V4VMW9_9ROSI | V4SKX2 | V4VMW9 | TP_methylase domain-containing protein. | CASP_C domain-containing protein. | 0.569 |
V4SKX2_9ROSI | V4WD26_9ROSI | V4SKX2 | V4WD26 | TP_methylase domain-containing protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.567 |
V4SNK1_9ROSI | V4SKX2_9ROSI | V4SNK1 | V4SKX2 | Uncharacterized protein. | TP_methylase domain-containing protein. | 0.569 |
V4SNK1_9ROSI | V4UHS9_9ROSI | V4SNK1 | V4UHS9 | Uncharacterized protein. | Uncharacterized protein. | 0.691 |
V4SNK1_9ROSI | V4VE22_9ROSI | V4SNK1 | V4VE22 | Uncharacterized protein. | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | 0.692 |
V4SNK1_9ROSI | V4VMW9_9ROSI | V4SNK1 | V4VMW9 | Uncharacterized protein. | CASP_C domain-containing protein. | 0.577 |
V4SNK1_9ROSI | V4WD26_9ROSI | V4SNK1 | V4WD26 | Uncharacterized protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.568 |
V4T7S8_9ROSI | V4VMW9_9ROSI | V4T7S8 | V4VMW9 | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | CASP_C domain-containing protein. | 0.543 |
V4UC83_9ROSI | V4S307_9ROSI | V4UC83 | V4S307 | Uncharacterized protein. | Guanylate kinase-like domain-containing protein. | 0.595 |
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