STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4VNB6_9ROSIUncharacterized protein. (166 aa)    
Predicted Functional Partners:
V4SZL2_9ROSI
S1 motif domain-containing protein.
     
 0.706
V4TMX0_9ROSI
SET domain-containing protein.
     
 0.705
V4W7P8_9ROSI
Uncharacterized protein.
     
 0.702
V4SII4_9ROSI
Uncharacterized protein.
     
 0.694
V4STJ9_9ROSI
PfkB domain-containing protein.
     
 0.652
V4T9N4_9ROSI
Uncharacterized protein.
  
   
 0.637
V4USF7_9ROSI
PfkB domain-containing protein.
      
 0.550
V4T9Z4_9ROSI
Purple acid phosphatase.
      
 0.549
V4SY23_9ROSI
Thioredoxin domain-containing protein.
      
 0.543
V4T8B1_9ROSI
SAP domain-containing protein.
      
 0.542
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.