STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TZB8_9ROSILOB domain-containing protein. (224 aa)    
Predicted Functional Partners:
V4S2G9_9ROSI
Uncharacterized protein.
    
 0.591
V4UP50_9ROSI
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
    
 0.571
V4TSK5_9ROSI
GRAM domain-containing protein.
  
     0.521
V4TJY1_9ROSI
SET domain-containing protein.
   
 0.502
V4SSR9_9ROSI
GRAM domain-containing protein.
  
     0.481
V4U141_9ROSI
Uncharacterized protein.
  
 
  0.479
V4SV99_9ROSI
ZF-HD dimerization-type domain-containing protein.
  
     0.476
V4TC71_9ROSI
GRAM domain-containing protein.
  
     0.475
V4S164_9ROSI
Protein kinase domain-containing protein.
    
 0.473
V4SV79_9ROSI
Protein kinase domain-containing protein.
    
 0.473
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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