Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO47801.1 | CDO48732.1 | BM1374166_00105 | BM1374166_01049 | Thiol: disulfide interchange protein. | Hypothetical protein. | 0.666 |
CDO47801.1 | CDO49619.1 | BM1374166_00105 | BM1374166_01975 | Thiol: disulfide interchange protein. | Hypothetical protein. | 0.666 |
CDO47801.1 | ccmA | BM1374166_00105 | BM1374166_00109 | Thiol: disulfide interchange protein. | Cytochrome c biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.844 |
CDO47801.1 | ccmB | BM1374166_00105 | BM1374166_00108 | Thiol: disulfide interchange protein. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.930 |
CDO47801.1 | ccmC | BM1374166_00105 | BM1374166_00107 | Thiol: disulfide interchange protein. | Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.978 |
CDO47801.1 | cycH | BM1374166_00105 | BM1374166_00655 | Thiol: disulfide interchange protein. | Cytochrome c-type biogenesis protein CycH. | 0.691 |
CDO47801.1 | cycJ | BM1374166_00105 | BM1374166_00656 | Thiol: disulfide interchange protein. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.879 |
CDO47801.1 | cycK | BM1374166_00105 | BM1374166_00657 | Thiol: disulfide interchange protein. | Cytochrome c-type biogenesis protein CycK. | 0.958 |
CDO47801.1 | cycL | BM1374166_00105 | BM1374166_00658 | Thiol: disulfide interchange protein. | Cytochrome c-type biogenesis protein CycL; Possible subunit of a heme lyase. | 0.883 |
CDO48732.1 | CDO47801.1 | BM1374166_01049 | BM1374166_00105 | Hypothetical protein. | Thiol: disulfide interchange protein. | 0.666 |
CDO48732.1 | cycK | BM1374166_01049 | BM1374166_00657 | Hypothetical protein. | Cytochrome c-type biogenesis protein CycK. | 0.672 |
CDO48732.1 | cycL | BM1374166_01049 | BM1374166_00658 | Hypothetical protein. | Cytochrome c-type biogenesis protein CycL; Possible subunit of a heme lyase. | 0.438 |
CDO48732.1 | tplA | BM1374166_01049 | BM1374166_02239 | Hypothetical protein. | Thiol:disulfide interchange protein. | 0.666 |
CDO49619.1 | CDO47801.1 | BM1374166_01975 | BM1374166_00105 | Hypothetical protein. | Thiol: disulfide interchange protein. | 0.666 |
CDO49619.1 | cycK | BM1374166_01975 | BM1374166_00657 | Hypothetical protein. | Cytochrome c-type biogenesis protein CycK. | 0.672 |
CDO49619.1 | cycL | BM1374166_01975 | BM1374166_00658 | Hypothetical protein. | Cytochrome c-type biogenesis protein CycL; Possible subunit of a heme lyase. | 0.438 |
CDO49619.1 | tplA | BM1374166_01975 | BM1374166_02239 | Hypothetical protein. | Thiol:disulfide interchange protein. | 0.666 |
ccmA | CDO47801.1 | BM1374166_00109 | BM1374166_00105 | Cytochrome c biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Thiol: disulfide interchange protein. | 0.844 |
ccmA | ccmB | BM1374166_00109 | BM1374166_00108 | Cytochrome c biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.999 |
ccmA | ccmC | BM1374166_00109 | BM1374166_00107 | Cytochrome c biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.997 |
page 1 of 4