STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO48897.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
CDO48895.1
Hypothetical protein.
 
     0.805
CDO48888.1
Phage related protein, virulence-associated.
 
     0.767
CDO48898.1
Hypothetical protein.
       0.759
CDO48899.1
Hypothetical protein.
       0.759
CDO48896.1
Hypothetical protein.
       0.744
CDO48893.1
Phage baseplate assembly protein gpW (fragment).
       0.743
CDO48894.1
Hypothetical protein.
       0.741
CDO48870.1
Hypothetical protein.
  
     0.740
CDO49024.1
Hypothetical protein.
  
     0.740
CDO49927.1
Hypothetical protein.
  
     0.740
Your Current Organism:
Bartonella tribocorum
NCBI taxonomy Id: 85701
Other names: B. tribocorum, CCUG 45778, CIP 105476, IBS 506
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.