CDO49197.1 protein (Bartonella tribocorum) - STRING interaction network

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Score

CDO49197.1

Putative ABC transporter ATP-binding protein. (549 aa)

Predicted Functional Partners:

rpoC

0.784

rplD

0.770

rplC

0.763

rplU

0.760

rpsG

0.758

rplM

0.756

rplT

0.755

rpsO

0.755

rplP

0.754

rpsC

0.754

Your Current Organism:

Bartonella tribocorum

NCBI taxonomy Id: 85701
Other names: B. tribocorum, CCUG 45778, CIP 105476, IBS 506

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDO49197.1	rplC	BM1374166_01532	BM1374166_01442	Putative ABC transporter ATP-binding protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.763
CDO49197.1	rplD	BM1374166_01532	BM1374166_01441	Putative ABC transporter ATP-binding protein.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.770
CDO49197.1	rplM	BM1374166_01532	BM1374166_01401	Putative ABC transporter ATP-binding protein.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.756
CDO49197.1	rplP	BM1374166_01532	BM1374166_01435	Putative ABC transporter ATP-binding protein.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.754
CDO49197.1	rplT	BM1374166_01532	BM1374166_00087	Putative ABC transporter ATP-binding protein.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.755
CDO49197.1	rplU	BM1374166_01532	BM1374166_00134	Putative ABC transporter ATP-binding protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.760
CDO49197.1	rpoC	BM1374166_01532	BM1374166_00838	Putative ABC transporter ATP-binding protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.784
CDO49197.1	rpsC	BM1374166_01532	BM1374166_01436	Putative ABC transporter ATP-binding protein.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.754
CDO49197.1	rpsG	BM1374166_01532	BM1374166_01446	Putative ABC transporter ATP-binding protein.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.758
CDO49197.1	rpsO	BM1374166_01532	BM1374166_00212	Putative ABC transporter ATP-binding protein.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.755
rplC	CDO49197.1	BM1374166_01442	BM1374166_01532	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Putative ABC transporter ATP-binding protein.	0.763
rplC	rplD	BM1374166_01442	BM1374166_01441	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplM	BM1374166_01442	BM1374166_01401	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplC	rplP	BM1374166_01442	BM1374166_01435	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplC	rplT	BM1374166_01442	BM1374166_00087	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.992
rplC	rplU	BM1374166_01442	BM1374166_00134	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplC	rpoC	BM1374166_01442	BM1374166_00838	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rplC	rpsC	BM1374166_01442	BM1374166_01436	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.997
rplC	rpsG	BM1374166_01442	BM1374166_01446	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.995
rplC	rpsO	BM1374166_01442	BM1374166_00212	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993