STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO49473.1Putative phage tail fiber protein. (334 aa)    
Predicted Functional Partners:
CDO49474.1
Putative phage related protein.
       0.776
CDO49475.1
Hypothetical protein.
       0.774
CDO49483.1
Putative phage portal protein.
  
     0.634
CDO49478.1
Phage related protein.
  
     0.626
CDO49338.1
Autotransporter.
  
     0.624
ibaE
Inducible autotransporter E.
  
     0.618
ibaC
Inducible autotransporter C.
  
     0.617
CDO49053.1
Autotransporter.
  
     0.610
CDO49335.1
Autotransporter.
  
     0.595
CDO49635.1
Phage related protein.
  
     0.590
Your Current Organism:
Bartonella tribocorum
NCBI taxonomy Id: 85701
Other names: B. tribocorum, CCUG 45778, CIP 105476, IBS 506
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