STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO49837.1Phage integrase. (176 aa)    
Predicted Functional Partners:
CDO49809.1
Phage integrase.
 
     0.772
CDO49212.1
Phage integrase.
 
     0.765
CDO49606.1
Phage integrase.
 
     0.712
CDO49741.1
Phage integrase.
 
     0.705
CDO49836.1
Phage integrase.
     0.689
CDO49838.1
Hypothetical DNA-binding protein.
       0.439
Your Current Organism:
Bartonella tribocorum
NCBI taxonomy Id: 85701
Other names: B. tribocorum, CCUG 45778, CIP 105476, IBS 506
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.