STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF98778.1Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (184 aa)    
Predicted Functional Partners:
AEF98777.1
PFAM: LRV FeS4 cluster; Leucine rich repeat variant; KEGG: avn:Avin_01440 nitrogen fixing leucine rich variant repeat 4Fe-4S cluster protein.
 
     0.862
AEF98776.1
KEGG: ttu:TERTU_4003 hypothetical protein.
       0.788
AEF98775.1
PFAM: Ankyrin repeat; KEGG: mca:MCA2117 rhodanese-like domain/ankyrin repeat-containing protein.
  
  
 0.757
AEG01158.1
TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: alv:Alvin_0264 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
     
 0.614
AEG01466.1
KEGG: dar:Daro_1511 hypothetical protein.
  
     0.465
AEG01240.1
KEGG: avn:Avin_40900 hypothetical protein.
 
     0.414
AEF99889.1
PFAM: LRV FeS4 cluster; Leucine rich repeat variant; KEGG: avn:Avin_01440 nitrogen fixing leucine rich variant repeat 4Fe-4S cluster protein.
 
     0.406
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.