STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF99443.1KEGG: gca:Galf_2409 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (249 aa)    
Predicted Functional Partners:
AEF99444.1
PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region.
    0.948
AEG01137.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.867
AEF98818.1
PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region.
    0.783
AEF99945.1
PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region.
    0.783
AEG01896.1
PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region.
    0.783
AEG02137.1
PFAM: Integrase, catalytic core; KEGG: pol:Bpro_5321 ISPsy20, transposase IstA.
    0.783
AEG02143.1
PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region.
    0.783
AEF99850.1
KEGG: hna:Hneap_1227 integrase catalytic region.
 
    0.775
AEG00355.1
KEGG: tau:Tola_1606 integrase catalytic region; manually curated; PFAM: Integrase, catalytic core.
  
    0.744
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.517
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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