STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF99665.1PFAM: Flavoprotein; KEGG: gbe:GbCGDNIH1_0764 flavoprotein. (179 aa)    
Predicted Functional Partners:
AEG00670.1
alpha-L-glutamate ligase, RimK family; KEGG: mca:MCA2864 ribosomal protein S6 modification protein, putative; TIGRFAM: S6 modification enzyme RimK; PFAM: ATP-grasp fold, RimK-type; Belongs to the RimK family.
  
  
  0.954
AEF99666.1
PFAM: Dihydropteroate synthase, DHPS; KEGG: mca:MCA1245 pterin-binding domain-containing protein.
 
     0.950
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
     0.829
AEG00582.1
PFAM: Protein of unknown function DUF556; KEGG: mca:MCA1243 hypothetical protein.
 
     0.803
AEG00581.1
PFAM: Protein of unknown function DUF447; KEGG: mfa:Mfla_1580 hypothetical protein.
 
     0.800
AEG00677.1
PFAM: Aspartate/glutamate/uridylate kinase; KEGG: bxe:Bxe_B2457 tetrahydromethanopterin biosynthesis protein, putative kinase.
 
     0.796
AEG00693.1
Beta-ribofuranosylaminobenzene 5'-phosphate synthase family; KEGG: mca:MCA2861 GHMP family kinase; TIGRFAM: GHMP kinase group 1; PFAM: GHMP kinase; GHMP kinase, C-terminal.
 
    0.792
AEF99112.1
KEGG: nhl:Nhal_0014 formylmethanofuran dehydrogenase subunit A; TIGRFAM: Formylmethanofuran dehydrogenase, subunit A; PFAM: Amidohydrolase 3.
 
     0.785
AEG01489.1
PFAM: Dihydropteroate synthase, DHPS; KEGG: mca:MCA1245 pterin-binding domain-containing protein.
 
     0.784
AEF99113.1
KEGG: nhl:Nhal_0015 formylmethanofuran dehydrogenase subunit B.
 
     0.779
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.