STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEG00082.1KEGG: mca:MCA0176 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein. (531 aa)    
Predicted Functional Partners:
AEG00081.1
Efflux transporter, RND family, MFP subunit; KEGG: mca:MCA0177 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.954
AEG00080.1
PFAM: Acriflavin resistance protein; KEGG: mca:MCA0178 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.940
AEG00895.1
PFAM: Secretion protein HlyD; KEGG: nde:NIDE3239 putative multidrug resistance protein A.
 
 
 0.763
AEF99961.1
KEGG: rpf:Rpic12D_4296 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.725
AEF98884.1
KEGG: nwa:Nwat_1286 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.673
AEF98883.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; KEGG: noc:Noc_1827 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein.
 
   0.596
AEF98555.1
KEGG: lby:Lbys_2566 transporter, hydrophobe/amphiphile efflux-1 (hae1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein.
 
   0.549
AEG00911.1
PFAM: Secretion protein HlyD; KEGG: sfu:Sfum_2390 secretion protein HlyD family protein.
 
 
 0.534
AEF98556.1
KEGG: lby:Lbys_2567 efflux transporter, rnd family, mfp subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.513
AEF99962.1
PFAM: Acriflavin resistance protein; KEGG: hse:Hsero_1521 cation/multidrug efflux pump transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.505
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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