STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG00427.1Adenylate cyclase; KEGG: cyn:Cyan7425_2057 leucine-rich repeat protein; PFAM: Leucine-rich repeat. (504 aa)    
Predicted Functional Partners:
AEG00428.1
KEGG: ant:Arnit_2460 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
       0.675
AEG02776.1
SMART: Ankyrin repeat; KEGG: slt:Slit_1312 ankyrin.
  
     0.580
AEG01309.1
TIR protein; SMART: Toll-Interleukin receptor; KEGG: amr:AM1_1973 leucine-rich repeat-containing protein.
     0.569
AEG00429.1
PFAM: FRG domain; KEGG: pwa:Pecwa_1726 FRG domain protein.
       0.518
AEF98474.1
KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1-like; SMART: Sel1-like.
  
     0.493
AEG00357.1
WD40 repeat-containing protein; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat.
  
     0.477
AEG00199.1
Miro domain protein; KEGG: cte:CT1526 Rab family protein; PFAM: MIRO-like; Toll-Interleukin receptor; SMART: Ras small GTPase, Rab type; Toll-Interleukin receptor.
 
     0.473
AEG00819.1
KEGG: dfe:Dfer_0662 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
  
     0.464
AEG00404.1
KEGG: mgm:Mmc1_2003 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like.
 
     0.434
AEF98547.1
PFAM: Ankyrin repeat; KEGG: spu:765588 similar to ankyrin 2,3/unc44.
  
     0.421
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.