node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF99418.1 | AEG01628.1 | Metme_0981 | Metme_3256 | TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: mmb:Mmol_2247 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | 0.916 |
AEF99418.1 | hfq | Metme_0981 | Metme_2845 | TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: mmb:Mmol_2247 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.831 |
AEF99844.1 | AEG01883.1 | Metme_1421 | Metme_3517 | KEGG: lic:LIC10551 hypothetical protein. | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kfl:Kfla_6004 endonuclease/exonuclease/phosphatase. | 0.419 |
AEF99844.1 | hfq | Metme_1421 | Metme_2845 | KEGG: lic:LIC10551 hypothetical protein. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.867 |
AEG01628.1 | AEF99418.1 | Metme_3256 | Metme_0981 | TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: mmb:Mmol_2247 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | 0.916 |
AEG01628.1 | hfq | Metme_3256 | Metme_2845 | TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.831 |
AEG01883.1 | AEF99844.1 | Metme_3517 | Metme_1421 | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kfl:Kfla_6004 endonuclease/exonuclease/phosphatase. | KEGG: lic:LIC10551 hypothetical protein. | 0.419 |
AEG01883.1 | hfq | Metme_3517 | Metme_2845 | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kfl:Kfla_6004 endonuclease/exonuclease/phosphatase. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.792 |
csrA | dksA | Metme_3699 | Metme_2396 | Carbon storage regulator, CsrA; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.443 |
csrA | hfq | Metme_3699 | Metme_2845 | Carbon storage regulator, CsrA; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.829 |
csrA | ihfA | Metme_3699 | Metme_1713 | Carbon storage regulator, CsrA; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.751 |
dksA | csrA | Metme_2396 | Metme_3699 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Carbon storage regulator, CsrA; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.443 |
dksA | hfq | Metme_2396 | Metme_2845 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.811 |
dksA | ihfA | Metme_2396 | Metme_1713 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.422 |
hflX | hfq | Metme_2844 | Metme_2845 | GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.904 |
hfq | AEF99418.1 | Metme_2845 | Metme_0981 | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: mmb:Mmol_2247 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | 0.831 |
hfq | AEF99844.1 | Metme_2845 | Metme_1421 | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | KEGG: lic:LIC10551 hypothetical protein. | 0.867 |
hfq | AEG01628.1 | Metme_2845 | Metme_3256 | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | 0.831 |
hfq | AEG01883.1 | Metme_2845 | Metme_3517 | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kfl:Kfla_6004 endonuclease/exonuclease/phosphatase. | 0.792 |
hfq | csrA | Metme_2845 | Metme_3699 | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Carbon storage regulator, CsrA; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.829 |