STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG02453.1KEGG: app:CAP2UW1_2589 hypothetical protein. (202 aa)    
Predicted Functional Partners:
AEG02452.1
PFAM: Protein of unknown function DUF2269, transmembrane; KEGG: nhl:Nhal_1253 integral membrane protein.
 
     0.950
AEG02451.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: nhl:Nhal_1254 NAD-dependent epimerase/dehydratase.
 
     0.935
AEG02450.1
KEGG: app:CAP2UW1_2592 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.854
AEG01033.1
KEGG: meh:M301_2440 hypothetical protein.
  
     0.640
AEF98810.1
KEGG: mfa:Mfla_2213 hypothetical protein.
  
     0.626
AEG02540.1
KEGG: dak:DaAHT2_0585 hypothetical protein.
  
     0.611
AEF99364.1
KEGG: tbd:Tbd_0362 hypothetical protein.
  
     0.610
AEF99904.1
Hypothetical protein.
  
     0.580
AEF99204.1
KEGG: nmu:Nmul_A1766 hypothetical protein; PFAM: Aminoglycoside phosphotransferase; SMART: CHK kinase-like.
  
     0.536
AEF99772.1
KEGG: noc:Noc_0134 hypothetical protein.
  
     0.535
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.