STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG02869.1KEGG: ilo:IL2326 hypothetical protein. (62 aa)    
Predicted Functional Partners:
AEG02868.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.664
AEG02866.1
PFAM: Glutaredoxin 2; KEGG: slo:Shew_1813 glutaredoxin 2.
 
     0.663
AEG01525.1
KEGG: mca:MCA0131 hypothetical protein.
 
    0.541
AEG02867.1
UPF0114 protein yqhA; PFAM: Uncharacterised protein family UPF0114, prokaryotic; manually curated; TIGRFAM: Uncharacterised protein family UPF0114, bacteria; KEGG: sbp:Sbal223_3668 hypothetical protein; HAMAP: Uncharacterised protein family UPF0114, gammaproteobacteria.
       0.538
AEG01530.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
    0.515
rdgC
Recombination-associated protein rdgC; May be involved in recombination; Belongs to the RdgC family.
  
     0.444
AEG02865.1
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.422
AEF99217.1
TIGRFAM: YgfB/YecA protein; KEGG: mca:MCA2771 hypothetical protein; Belongs to the UPF0149 family.
  
     0.410
AEG00251.1
TIGRFAM: Conserved hypothetical protein CHP00661; KEGG: mca:MCA2984 hypothetical protein.
  
     0.409
AEF99322.1
KEGG: mca:MCA0564 hypothetical protein.
  
     0.406
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.