Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EJD64896.1 | EJD65251.1 | HMPREF9156_00771 | HMPREF9156_00015 | Hypothetical protein. | Hypothetical protein. | 0.769 |
EJD64896.1 | EJD65417.1 | HMPREF9156_00771 | HMPREF9156_00181 | Hypothetical protein. | Hypothetical protein. | 0.740 |
EJD64896.1 | EJD65444.1 | HMPREF9156_00771 | HMPREF9156_00208 | Hypothetical protein. | Hypothetical protein. | 0.446 |
EJD64896.1 | gpsA | HMPREF9156_00771 | HMPREF9156_01234 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.561 |
EJD64896.1 | murG | HMPREF9156_00771 | HMPREF9156_00038 | Hypothetical protein. | Hypothetical protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.451 |
EJD65118.1 | EJD65251.1 | HMPREF9156_00562 | HMPREF9156_00015 | Hypothetical protein. | Hypothetical protein. | 0.887 |
EJD65118.1 | EJD65541.1 | HMPREF9156_00562 | HMPREF9156_00305 | Hypothetical protein. | DNA polymerase I. | 0.853 |
EJD65118.1 | glgB | HMPREF9156_00562 | HMPREF9156_00319 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.531 |
EJD65118.1 | gpsA | HMPREF9156_00562 | HMPREF9156_01234 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.817 |
EJD65118.1 | murG | HMPREF9156_00562 | HMPREF9156_00038 | Hypothetical protein. | Hypothetical protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.608 |
EJD65251.1 | EJD64896.1 | HMPREF9156_00015 | HMPREF9156_00771 | Hypothetical protein. | Hypothetical protein. | 0.769 |
EJD65251.1 | EJD65118.1 | HMPREF9156_00015 | HMPREF9156_00562 | Hypothetical protein. | Hypothetical protein. | 0.887 |
EJD65251.1 | EJD65417.1 | HMPREF9156_00015 | HMPREF9156_00181 | Hypothetical protein. | Hypothetical protein. | 0.730 |
EJD65251.1 | EJD65444.1 | HMPREF9156_00015 | HMPREF9156_00208 | Hypothetical protein. | Hypothetical protein. | 0.743 |
EJD65251.1 | EJD65541.1 | HMPREF9156_00015 | HMPREF9156_00305 | Hypothetical protein. | DNA polymerase I. | 0.800 |
EJD65251.1 | EJD65649.1 | HMPREF9156_00015 | HMPREF9156_00413 | Hypothetical protein. | Hypothetical protein. | 0.734 |
EJD65251.1 | EJD65651.1 | HMPREF9156_00015 | HMPREF9156_00415 | Hypothetical protein. | Hypothetical protein. | 0.753 |
EJD65251.1 | glgB | HMPREF9156_00015 | HMPREF9156_00319 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.895 |
EJD65251.1 | gpsA | HMPREF9156_00015 | HMPREF9156_01234 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.739 |
EJD65251.1 | murG | HMPREF9156_00015 | HMPREF9156_00038 | Hypothetical protein. | Hypothetical protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.744 |
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