Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EJD65051.1 | EJD65104.1 | HMPREF9156_00495 | HMPREF9156_00548 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase. | 0.979 |
EJD65051.1 | EJD65248.1 | HMPREF9156_00495 | HMPREF9156_00012 | Hypothetical protein. | Phosphoribosylformylglycinamidine synthase. | 0.621 |
EJD65051.1 | EJD65464.1 | HMPREF9156_00495 | HMPREF9156_00228 | Hypothetical protein. | Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.802 |
EJD65051.1 | EJD65515.1 | HMPREF9156_00495 | HMPREF9156_00279 | Hypothetical protein. | Xanthine permease. | 0.558 |
EJD65051.1 | carA | HMPREF9156_00495 | HMPREF9156_00141 | Hypothetical protein. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.738 |
EJD65051.1 | carB | HMPREF9156_00495 | HMPREF9156_00142 | Hypothetical protein. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.774 |
EJD65051.1 | pyrB | HMPREF9156_00495 | HMPREF9156_00230 | Hypothetical protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.740 |
EJD65051.1 | pyrF | HMPREF9156_00495 | HMPREF9156_00227 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.979 |
EJD65104.1 | EJD65051.1 | HMPREF9156_00548 | HMPREF9156_00495 | Orotidine 5'-phosphate decarboxylase. | Hypothetical protein. | 0.979 |
EJD65104.1 | EJD65248.1 | HMPREF9156_00548 | HMPREF9156_00012 | Orotidine 5'-phosphate decarboxylase. | Phosphoribosylformylglycinamidine synthase. | 0.569 |
EJD65104.1 | EJD65464.1 | HMPREF9156_00548 | HMPREF9156_00228 | Orotidine 5'-phosphate decarboxylase. | Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.803 |
EJD65104.1 | EJD65515.1 | HMPREF9156_00548 | HMPREF9156_00279 | Orotidine 5'-phosphate decarboxylase. | Xanthine permease. | 0.569 |
EJD65104.1 | carA | HMPREF9156_00548 | HMPREF9156_00141 | Orotidine 5'-phosphate decarboxylase. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.816 |
EJD65104.1 | carB | HMPREF9156_00548 | HMPREF9156_00142 | Orotidine 5'-phosphate decarboxylase. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.938 |
EJD65104.1 | pyrB | HMPREF9156_00548 | HMPREF9156_00230 | Orotidine 5'-phosphate decarboxylase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.822 |
EJD65104.1 | pyrE | HMPREF9156_00548 | HMPREF9156_00224 | Orotidine 5'-phosphate decarboxylase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.995 |
EJD65104.1 | pyrF | HMPREF9156_00548 | HMPREF9156_00227 | Orotidine 5'-phosphate decarboxylase. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.965 |
EJD65248.1 | EJD65051.1 | HMPREF9156_00012 | HMPREF9156_00495 | Phosphoribosylformylglycinamidine synthase. | Hypothetical protein. | 0.621 |
EJD65248.1 | EJD65104.1 | HMPREF9156_00012 | HMPREF9156_00548 | Phosphoribosylformylglycinamidine synthase. | Orotidine 5'-phosphate decarboxylase. | 0.569 |
EJD65248.1 | EJD65464.1 | HMPREF9156_00012 | HMPREF9156_00228 | Phosphoribosylformylglycinamidine synthase. | Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.531 |
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