Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EJD65020.1 | EJD65361.1 | HMPREF9156_00464 | HMPREF9156_00125 | hydroxymethylglutaryl-CoA reductase, degradative. | Hypothetical protein; Belongs to the FPP/GGPP synthase family. | 0.661 |
EJD65020.1 | EJD65666.1 | HMPREF9156_00464 | HMPREF9156_00430 | hydroxymethylglutaryl-CoA reductase, degradative. | Hypothetical protein. | 0.765 |
EJD65057.1 | EJD65666.1 | HMPREF9156_00501 | HMPREF9156_00430 | Hypothetical protein. | Hypothetical protein. | 0.482 |
EJD65361.1 | EJD65020.1 | HMPREF9156_00125 | HMPREF9156_00464 | Hypothetical protein; Belongs to the FPP/GGPP synthase family. | hydroxymethylglutaryl-CoA reductase, degradative. | 0.661 |
EJD65361.1 | EJD65666.1 | HMPREF9156_00125 | HMPREF9156_00430 | Hypothetical protein; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.640 |
EJD65666.1 | EJD65020.1 | HMPREF9156_00430 | HMPREF9156_00464 | Hypothetical protein. | hydroxymethylglutaryl-CoA reductase, degradative. | 0.765 |
EJD65666.1 | EJD65057.1 | HMPREF9156_00430 | HMPREF9156_00501 | Hypothetical protein. | Hypothetical protein. | 0.482 |
EJD65666.1 | EJD65361.1 | HMPREF9156_00430 | HMPREF9156_00125 | Hypothetical protein. | Hypothetical protein; Belongs to the FPP/GGPP synthase family. | 0.640 |
EJD65666.1 | EJD65668.1 | HMPREF9156_00430 | HMPREF9156_00432 | Hypothetical protein. | YhbY family putative RNA-binding protein. | 0.454 |
EJD65666.1 | gpmA | HMPREF9156_00430 | HMPREF9156_00429 | Hypothetical protein. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.754 |
EJD65666.1 | lysS | HMPREF9156_00430 | HMPREF9156_00431 | Hypothetical protein. | lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.813 |
EJD65668.1 | EJD65666.1 | HMPREF9156_00432 | HMPREF9156_00430 | YhbY family putative RNA-binding protein. | Hypothetical protein. | 0.454 |
EJD65668.1 | lysS | HMPREF9156_00432 | HMPREF9156_00431 | YhbY family putative RNA-binding protein. | lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.454 |
gpmA | EJD65666.1 | HMPREF9156_00429 | HMPREF9156_00430 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Hypothetical protein. | 0.754 |
gpmA | lysS | HMPREF9156_00429 | HMPREF9156_00431 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.681 |
lysS | EJD65666.1 | HMPREF9156_00431 | HMPREF9156_00430 | lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.813 |
lysS | EJD65668.1 | HMPREF9156_00431 | HMPREF9156_00432 | lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | YhbY family putative RNA-binding protein. | 0.454 |
lysS | gpmA | HMPREF9156_00431 | HMPREF9156_00429 | lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.681 |