Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EJD64934.1 | EJD65067.1 | HMPREF9156_00809 | HMPREF9156_00511 | Thioredoxin-disulfide reductase. | Hypothetical protein. | 0.933 |
EJD64934.1 | EJD65522.1 | HMPREF9156_00809 | HMPREF9156_00286 | Thioredoxin-disulfide reductase. | Hypothetical protein. | 0.404 |
EJD65067.1 | EJD64934.1 | HMPREF9156_00511 | HMPREF9156_00809 | Hypothetical protein. | Thioredoxin-disulfide reductase. | 0.933 |
EJD65067.1 | EJD65068.1 | HMPREF9156_00511 | HMPREF9156_00512 | Hypothetical protein. | Hypothetical protein. | 0.796 |
EJD65067.1 | EJD65225.1 | HMPREF9156_00511 | HMPREF9156_00669 | Hypothetical protein. | Hypothetical protein. | 0.747 |
EJD65067.1 | EJD65293.1 | HMPREF9156_00511 | HMPREF9156_00057 | Hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.723 |
EJD65067.1 | EJD65522.1 | HMPREF9156_00511 | HMPREF9156_00286 | Hypothetical protein. | Hypothetical protein. | 0.729 |
EJD65067.1 | EJD65584.1 | HMPREF9156_00511 | HMPREF9156_00348 | Hypothetical protein. | Hypothetical protein. | 0.738 |
EJD65067.1 | EJD65586.1 | HMPREF9156_00511 | HMPREF9156_00350 | Hypothetical protein. | Hypothetical protein. | 0.709 |
EJD65067.1 | EJD65656.1 | HMPREF9156_00511 | HMPREF9156_00420 | Hypothetical protein. | Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.749 |
EJD65067.1 | fusA | HMPREF9156_00511 | HMPREF9156_00662 | Hypothetical protein. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.727 |
EJD65067.1 | groL | HMPREF9156_00511 | HMPREF9156_01057 | Hypothetical protein. | Chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.720 |
EJD65068.1 | EJD65067.1 | HMPREF9156_00512 | HMPREF9156_00511 | Hypothetical protein. | Hypothetical protein. | 0.796 |
EJD65068.1 | EJD65584.1 | HMPREF9156_00512 | HMPREF9156_00348 | Hypothetical protein. | Hypothetical protein. | 0.658 |
EJD65225.1 | EJD65067.1 | HMPREF9156_00669 | HMPREF9156_00511 | Hypothetical protein. | Hypothetical protein. | 0.747 |
EJD65225.1 | EJD65584.1 | HMPREF9156_00669 | HMPREF9156_00348 | Hypothetical protein. | Hypothetical protein. | 0.418 |
EJD65225.1 | EJD65586.1 | HMPREF9156_00669 | HMPREF9156_00350 | Hypothetical protein. | Hypothetical protein. | 0.591 |
EJD65225.1 | fusA | HMPREF9156_00669 | HMPREF9156_00662 | Hypothetical protein. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.872 |
EJD65293.1 | EJD65067.1 | HMPREF9156_00057 | HMPREF9156_00511 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.723 |
EJD65293.1 | EJD65522.1 | HMPREF9156_00057 | HMPREF9156_00286 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.869 |
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