STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJD65095.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
EJD65097.1
Hypothetical protein.
 
    0.801
EJD65094.1
Hypothetical protein.
       0.773
EJD64822.1
Hypothetical protein.
  
     0.704
EJD65096.1
Hypothetical protein; Belongs to the helicase family. UvrD subfamily.
 
    0.699
EJD65089.1
Hypothetical protein.
  
     0.552
EJD64842.1
Hypothetical protein.
  
     0.545
EJD64843.1
Hypothetical protein.
  
     0.545
EJD64571.1
Hypothetical protein.
  
     0.532
EJD65076.1
Hypothetical protein.
 
     0.523
rnj
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.510
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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