STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJD64899.1Hypothetical protein. (589 aa)    
Predicted Functional Partners:
EJD64898.1
Potassium/sodium efflux P-type ATPase, fungal-type.
  
    0.571
EJD64571.1
Hypothetical protein.
  
     0.569
EJD64713.1
Hypothetical protein.
  
  
 0.533
EJD65528.1
Hypothetical protein.
 
     0.484
EJD65596.1
Hypothetical protein.
  
    0.479
EJD64968.1
Hypothetical protein.
  
    0.479
EJD64544.1
Hypothetical protein.
  
    0.478
EJD64900.1
RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.430
EJD64817.1
Hypothetical protein.
 
    0.428
EJD65367.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.