Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EJD64773.1 | EJD64917.1 | HMPREF9156_00892 | HMPREF9156_00792 | Hypothetical protein. | Hypothetical protein. | 0.765 |
EJD64773.1 | EJD64943.1 | HMPREF9156_00892 | HMPREF9156_00818 | Hypothetical protein. | Hypothetical protein. | 0.770 |
EJD64773.1 | EJD65295.1 | HMPREF9156_00892 | HMPREF9156_00059 | Hypothetical protein. | HPr family phosphocarrier. | 0.689 |
EJD64773.1 | EJD65297.1 | HMPREF9156_00892 | HMPREF9156_00061 | Hypothetical protein. | PTS system, glucose subfamily, IIA component. | 0.873 |
EJD64773.1 | EJD65448.1 | HMPREF9156_00892 | HMPREF9156_00212 | Hypothetical protein. | Transketolase; Belongs to the transketolase family. | 0.519 |
EJD64773.1 | guaA | HMPREF9156_00892 | HMPREF9156_00291 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.616 |
EJD64773.1 | guaB | HMPREF9156_00892 | HMPREF9156_00384 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.633 |
EJD64773.1 | pheT | HMPREF9156_00892 | HMPREF9156_01094 | Hypothetical protein. | phenylalanine-tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.616 |
EJD64773.1 | tig | HMPREF9156_00892 | HMPREF9156_00152 | Hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.518 |
EJD64917.1 | EJD64773.1 | HMPREF9156_00792 | HMPREF9156_00892 | Hypothetical protein. | Hypothetical protein. | 0.765 |
EJD64917.1 | EJD64943.1 | HMPREF9156_00792 | HMPREF9156_00818 | Hypothetical protein. | Hypothetical protein. | 0.775 |
EJD64917.1 | EJD65295.1 | HMPREF9156_00792 | HMPREF9156_00059 | Hypothetical protein. | HPr family phosphocarrier. | 0.689 |
EJD64917.1 | EJD65297.1 | HMPREF9156_00792 | HMPREF9156_00061 | Hypothetical protein. | PTS system, glucose subfamily, IIA component. | 0.853 |
EJD64917.1 | EJD65448.1 | HMPREF9156_00792 | HMPREF9156_00212 | Hypothetical protein. | Transketolase; Belongs to the transketolase family. | 0.519 |
EJD64917.1 | guaA | HMPREF9156_00792 | HMPREF9156_00291 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.616 |
EJD64917.1 | guaB | HMPREF9156_00792 | HMPREF9156_00384 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.633 |
EJD64917.1 | pheT | HMPREF9156_00792 | HMPREF9156_01094 | Hypothetical protein. | phenylalanine-tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.616 |
EJD64917.1 | tig | HMPREF9156_00792 | HMPREF9156_00152 | Hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.518 |
EJD64943.1 | EJD64773.1 | HMPREF9156_00818 | HMPREF9156_00892 | Hypothetical protein. | Hypothetical protein. | 0.770 |
EJD64943.1 | EJD64917.1 | HMPREF9156_00818 | HMPREF9156_00792 | Hypothetical protein. | Hypothetical protein. | 0.775 |
page 1 of 4