STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJD64991.1Hypothetical protein. (508 aa)    
Predicted Functional Partners:
EJD64996.1
Hypothetical protein.
  
 
 0.796
EJD65236.1
LPXTG-domain-containing protein cell wall anchor domain.
 
    
0.780
EJD65054.1
Hypothetical protein.
  
     0.552
EJD64803.1
Type VII secretion protein EssC.
  
    0.512
EJD65528.1
Hypothetical protein.
  
  
  0.508
EJD65545.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.504
EJD64702.1
Hypothetical protein.
  
     0.502
EJD64883.1
Hypothetical protein.
  
     0.478
EJD65170.1
Hypothetical protein.
  
     0.476
EJD65097.1
Hypothetical protein.
  
     0.475
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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