STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcAArginine deiminase. (444 aa)    
Predicted Functional Partners:
EJD64497.1
Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 0.996
EJD65531.1
Phosphate acetyltransferase.
   
  
 0.672
EJD64832.1
Agmatinase; Belongs to the arginase family.
    
 0.615
EJD64494.1
Hypothetical protein.
       0.528
EJD64495.1
Hypothetical protein.
       0.528
EJD64650.1
Hypothetical protein.
  
 
 0.497
EJD64671.1
Hypothetical protein.
   
    0.467
EJD64672.1
Hypothetical protein.
   
    0.467
EJD65518.1
Hypothetical protein.
   
    0.465
EJD65113.1
Hypothetical protein.
   
    0.465
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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