STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJD64514.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
EJD64513.1
Hypothetical protein.
 
     0.796
EJD64512.1
Putative hydrolase.
 
     0.771
EJD64567.1
Hypothetical protein.
  
     0.766
EJD64736.1
Hypothetical protein.
  
     0.750
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.747
EJD65368.1
Hypothetical protein.
  
     0.722
EJD64918.1
Hypothetical protein.
  
     0.677
EJD65264.1
Hypothetical protein.
  
     0.585
EJD64621.1
Hypothetical protein.
  
     0.579
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
  
     0.570
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.