STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJD64573.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
EJD65171.1
Hypothetical protein.
 
    
0.928
EJD64997.1
Hypothetical protein.
 
    
0.928
EJD64902.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
   
 
0.923
EJD65076.1
Hypothetical protein.
 
  0.845
EJD64574.1
Hypothetical protein.
    
  0.803
EJD64571.1
Hypothetical protein.
 
  
 0.760
EJD65109.1
Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
  
 
0.710
EJD65309.1
Glutamate transport ATP-binding protein GluA.
 
   
 
0.694
EJD65063.1
Hypothetical protein.
     0.666
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.656
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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