Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EJD64551.1 | EJD64663.1 | HMPREF9156_01046 | HMPREF9156_01158 | Hypothetical protein. | Phosphoribosylamine-glycine ligase. | 0.898 |
EJD64551.1 | EJD65248.1 | HMPREF9156_01046 | HMPREF9156_00012 | Hypothetical protein. | Phosphoribosylformylglycinamidine synthase. | 0.999 |
EJD64551.1 | guaA | HMPREF9156_01046 | HMPREF9156_00291 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.888 |
EJD64551.1 | purC | HMPREF9156_01046 | HMPREF9156_00013 | Hypothetical protein. | Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.994 |
EJD64551.1 | purE | HMPREF9156_01046 | HMPREF9156_00005 | Hypothetical protein. | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.934 |
EJD64551.1 | purF | HMPREF9156_01046 | HMPREF9156_00011 | Hypothetical protein. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.950 |
EJD64551.1 | purH | HMPREF9156_01046 | HMPREF9156_00196 | Hypothetical protein. | Bifunctional purine biosynthesis protein purH. | 0.998 |
EJD64551.1 | purK | HMPREF9156_01046 | HMPREF9156_00006 | Hypothetical protein. | Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.916 |
EJD64551.1 | purM | HMPREF9156_01046 | HMPREF9156_00010 | Hypothetical protein. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.907 |
EJD64663.1 | EJD64551.1 | HMPREF9156_01158 | HMPREF9156_01046 | Phosphoribosylamine-glycine ligase. | Hypothetical protein. | 0.898 |
EJD64663.1 | EJD65248.1 | HMPREF9156_01158 | HMPREF9156_00012 | Phosphoribosylamine-glycine ligase. | Phosphoribosylformylglycinamidine synthase. | 0.996 |
EJD64663.1 | guaA | HMPREF9156_01158 | HMPREF9156_00291 | Phosphoribosylamine-glycine ligase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.757 |
EJD64663.1 | purC | HMPREF9156_01158 | HMPREF9156_00013 | Phosphoribosylamine-glycine ligase. | Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.908 |
EJD64663.1 | purE | HMPREF9156_01158 | HMPREF9156_00005 | Phosphoribosylamine-glycine ligase. | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.820 |
EJD64663.1 | purF | HMPREF9156_01158 | HMPREF9156_00011 | Phosphoribosylamine-glycine ligase. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.845 |
EJD64663.1 | purH | HMPREF9156_01158 | HMPREF9156_00196 | Phosphoribosylamine-glycine ligase. | Bifunctional purine biosynthesis protein purH. | 0.842 |
EJD64663.1 | purK | HMPREF9156_01158 | HMPREF9156_00006 | Phosphoribosylamine-glycine ligase. | Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.739 |
EJD64663.1 | purM | HMPREF9156_01158 | HMPREF9156_00010 | Phosphoribosylamine-glycine ligase. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.824 |
EJD64663.1 | purT | HMPREF9156_01158 | HMPREF9156_00014 | Phosphoribosylamine-glycine ligase. | Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.689 |
EJD65248.1 | EJD64551.1 | HMPREF9156_00012 | HMPREF9156_01046 | Phosphoribosylformylglycinamidine synthase. | Hypothetical protein. | 0.999 |
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