STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJD64668.1Hypothetical protein; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
EJD64670.1
Hypothetical protein.
 
  
  0.869
EJD64669.1
Hypothetical protein.
 
     0.637
EJD64667.1
Hypothetical protein.
       0.551
EJD64673.1
Hypothetical protein.
 
     0.472
EJD64676.1
Hypothetical protein.
 
     0.443
EJD64678.1
Hypothetical protein.
 
     0.421
EJD64671.1
Hypothetical protein.
       0.417
EJD64672.1
Hypothetical protein.
       0.417
EJD65118.1
Hypothetical protein.
  
  
 0.404
EJD64666.1
Hypothetical protein.
  
    0.401
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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