STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJD64671.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
EJD64672.1
Hypothetical protein.
     0.994
EJD65204.1
Hypothetical protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.820
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
    0.748
EJD64670.1
Hypothetical protein.
       0.741
EJD64673.1
Hypothetical protein.
       0.702
EJD64669.1
Hypothetical protein.
       0.647
EJD64674.1
Hypothetical protein.
  
    0.548
EJD64675.1
Hypothetical protein.
  
    0.526
EJD64677.1
Hypothetical protein.
  
 
  0.521
EJD65540.1
YbgI/family dinuclear metal center protein.
    
   0.518
Your Current Organism:
Scardovia wiggsiae
NCBI taxonomy Id: 857290
Other names: S. wiggsiae F0424, Scardovia wiggsiae F0424, Scardovia wiggsiae str. F0424, Scardovia wiggsiae strain F0424
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