STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG17007.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
EHG17005.1
Hypothetical protein.
 
     0.839
EHG17008.1
Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.837
ftsA
Hypothetical protein; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 
 0.832
EHG16220.1
Hypothetical protein.
  
    0.792
EHG17183.1
Hypothetical protein.
  
     0.773
EHG15214.1
Hypothetical protein.
  
     0.772
EHG15862.1
Hypothetical protein.
  
     0.771
EHG16316.1
Hypothetical protein.
  
     0.766
EHG16672.1
Hypothetical protein.
  
     0.765
EHG15112.1
Hypothetical protein.
  
     0.760
Your Current Organism:
Prevotella histicola
NCBI taxonomy Id: 857291
Other names: P. histicola F0411, Prevotella histicola F0411, Prevotella histicola str. F0411, Prevotella histicola strain F0411
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.