STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG15419.1Hypothetical protein. (470 aa)    
Predicted Functional Partners:
EHG15423.1
Hypothetical protein.
 
 
  0.662
EHG17381.1
Hypothetical protein.
  
     0.638
EHG15421.1
Hypothetical protein.
    
  0.627
EHG15424.1
Trehalase.
    
  0.570
EHG15422.1
Hypothetical protein.
 
     0.542
EHG16732.1
Hypothetical protein.
  
     0.493
EHG15418.1
Hypothetical protein.
       0.480
EHG16595.1
Hypothetical protein.
  
 
  0.477
EHG15602.1
Hypothetical protein.
  
     0.466
EHG15062.1
Hypothetical protein.
  
 
 0.464
Your Current Organism:
Prevotella histicola
NCBI taxonomy Id: 857291
Other names: P. histicola F0411, Prevotella histicola F0411, Prevotella histicola str. F0411, Prevotella histicola strain F0411
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.