Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG15419.1Hypothetical protein. (470 aa)    
Predicted Functional Partners:
EHG17381.1
Hypothetical protein.
  
     0.638
EHG15423.1
Hypothetical protein.
 
    0.561
EHG15422.1
Hypothetical protein.
 
     0.541
EHG15421.1
Hypothetical protein.
     
 0.525
EHG16732.1
Hypothetical protein.
  
     0.493
EHG15418.1
Hypothetical protein.
       0.480
EHG15602.1
Hypothetical protein.
  
     0.466
EHG15417.1
Hypothetical protein.
       0.455
EHG15416.1
Hypothetical protein.
       0.444
Your Current Organism:
Prevotella histicola
NCBI taxonomy Id: 857291
Other names: P. histicola F0411, Prevotella histicola F0411, Prevotella histicola str. F0411, Prevotella histicola strain F0411
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