Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG15217.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
EHG17183.1
Hypothetical protein.
  
 
   0.924
EHG15859.1
Hypothetical protein.
   
   0.886
EHG15862.1
Hypothetical protein.
   
   0.848
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.652
EHG16668.1
Hypothetical protein.
   
 
 0.643
EHG17145.1
Hypothetical protein.
    
   0.634
EHG16704.1
Hypothetical protein.
    
   0.634
EHG15480.1
Hypothetical protein.
    
   0.634
EHG16812.1
Hypothetical protein.
   
   0.632
EHG17389.1
Hypothetical protein.
    
  0.599
Your Current Organism:
Prevotella histicola
NCBI taxonomy Id: 857291
Other names: P. histicola F0411, Prevotella histicola F0411, Prevotella histicola str. F0411, Prevotella histicola strain F0411
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