STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_00172-oxoglutarate oxidoreductase, alpha subunit. (88 aa)    
Predicted Functional Partners:
CAAU_0562
Pyruvate-flavodoxin oxidoreductase.
  
 0.999
CAAU_0016
2-oxoglutarate oxidoreductase, beta subunit.
 
 0.996
CAAU_0015
2-oxoglutarate oxidoreductase, gamma subunit.
 
 0.994
CAAU_0018
2-oxoglutarate oxidoreductase, alpha subunit.
     0.986
CAAU_0019
2-oxoglutarate oxidoreductase, delta subunit,putative.
 
 
 0.944
CAAU_2291
Pyruvate:ferredoxin oxidoreductase, beta subunit.
  
 0.929
CAAU_2292
Pyruvate:ferredoxin oxidoreductase, beta subunit.
  
 0.929
CAAU_2289
Pyruvate:ferredoxin oxidoreductase, delta subunit.
  
 0.924
CAAU_2288
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
  
 0.891
CAAU_2434
NAD-reducing hydrogenase subunit HoxF.
  
 
 0.855
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.