STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_0064Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (274 aa)    
Predicted Functional Partners:
CAAU_1536
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
    0.897
CAAU_1917
Hypothetical protein.
  
 0.888
CAAU_1614
NADH-ubiquinone oxidoreductase chain D; Belongs to the complex I 49 kDa subunit family.
     
 0.840
CAAU_2434
NAD-reducing hydrogenase subunit HoxF.
    
 0.826
CAAU_1250
Hypothetical protein.
     
 0.808
CAAU_1613
NADH-ubiquinone oxidoreductase chain C.
     
 0.808
CAAU_0207
NAD-reducing hydrogenase subunit HoxF.
    
 0.803
CAAU_0204
NAD-reducing hydrogenase subunit HoxE.
     
 0.802
CAAU_2432
NADH dehydrogenase (ubiquinone), 24 kDa subunit.
     
 0.802
CAAU_1615
Glutamate synthase [NADPH] small chain.
  
 
 0.760
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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