STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_0087Macrolide export ATP-binding/permease protein MacB. (402 aa)    
Predicted Functional Partners:
macB
ABC-type transport systems, involved in lipoprotein release, ATPase components; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 0.999
CAAU_0089
Probable Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.998
CAAU_1914
ABC transporter, ATPase component.
 0.997
CAAU_0175
ABC transporter related.
 
 0.987
CAAU_2425
Conserved hypothetical protein.
  
 
 0.918
ftsE
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1); Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.916
CAAU_0453
Hydroxymethylpyrimidine ABC transporter, ATPase component.
 
     0.911
CAAU_2264
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
     0.911
CAAU_1477
Zinc ABC transporter, ATP-binding protein ZnuC.
 
    0.904
CAAU_2033
HlyD family secretion protein.
 
  
 0.901
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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